selected Publications
See selected project-related publications below. Taxon-omics members are shown in bold.
2024
Acosta E., Nitsche F. and H. Arndt (2024): Protist diversity and co-occurrence patterns obtained by metabarcoding of terricolous 2 lichens, coastal hills and a microbial mat in the Atacama Desert, northern Chile. European Journal of Protistology. [DOI: 10.1016/j.ejop.2024.126108]
Acosta E., Nitsche F., Dorador C. and H. Arndt (2024): Protist communities of microbial mats from the extreme environments of five saline Andean lagoons at high altitudes in the Atacama Desert. Frontiers Microbiology. [DOI: 10.3389/fmicb.2024.1356977]
Ahrens, D. (2024): Species Diagnosis and DNA Taxonomy. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_2]
Becher E., Bamberger S. and B. Hausdorf (2024): Phylogeny and species delimitation in Albinaria from western Crete (Gastropoda: Clausiliidae). Zoological Journal of the Linnean Society, zlae061. [DOI: 10.1093/zoolinnean/zlae061]
Berasategui J.A., Žerdoner Čalasan A. and G. Kadereit (2024): Biogeography of Australian Camphorosmeae and diversification in climatic space and across arid habitat types. Ecology and Evolution. [DOI: 10.1002/ece3.70558]
Bradican J.P., Tomasello S., Vollmer J. and E. Hörandl (2024): Converging forms: an examination of sub-arctic, circumarctic, and central Asian Ranunculus auricomus agg. populations. Frontiers in Plant Science, 15: 1415059. [DOI: 10.3389/fpls.2024.1415059]
Cedeño-Sanchez M., Lambert C., Mejia L.C., Ebada S.S. and M. Stadler (2024): Chemotaxonomic and molecular phylogenetic studies of selected Hypoxylon species from the Neotropics. Mycology. [DOI: 10.1080/21501203.2024.2378071]
Dietz L., Kukowka S., Eberle J., Mayer C., Niehuis O., Podsiadlowski L. and D. Ahrens (2024): Museomics reveal origins of East African Pleophylla forest chafers and Miocene forest connectivity. Molecular Phylogenetics and Evolution. [DOI: 10.1016/j.ympev.2024.108210]
Dufresnes C., Ghielmi S., Halpern B., Martínez-Freiría F., Mebert K., Jelić D., Crnobrnja-Isailović J., Gippner S., Jablonski D., Joger U., Laddaga L., Petrovan S., Tomović L., Vörös J, İğci N., Kariş M., Zinenko O. and S. Ursenbacher (2024): Phylogenomic insights into the diversity and evolution of Palearctic vipers. Molecular Phylogenetics and Evolution. [DOI: 10.1016/j.ympev.2024.108095]
Ehemann N., Franchini P., Meyer A. and C.D. Hulsey (2024): Meristic co-evolution and genomic co-localization of lateral line scales and vertebrae in Central American cichlid fishes. Ecology and Evolution. [DOI: 10.1002/ece3.70266]
Eterovick P.C., Schmidt R., Sabino-Pinto J., Yang C., Künzel S. and K. Ruthsatz (2024): The microbiome at the interface between environmental stress and animal health: an example from the most threatened vertebrate group. Proceedings of the Royal Society B. [DOI: 10.1098/rspb.2024.0917]
Fedosov A., Puillandre N., Fischell F., Patmanidis S., Miralles A. and M. Vences (2024): DNA Barcode-Based Species Diagnosis with MolD. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_19]
Freudenthal J., Dumack K., Schaffer S., Schlegel M. and M. Bonkowski (2024): Algae-fungi symbioses and bacteria-fungi co-exclusion drive tree species-specific differences in canopy bark microbiomes. The ISME Journal, wrae206. [DOI: 10.1093/ismejo/wrae206]
Gippner S., Strowbridge N., Šunje E., Capstick M., Amat F., Bogaerts S., Merabet K., Preissler K., Galán P., Martínez-Solano I., Bonato L., Steinfartz S., Velo-Antón G., Dufresnes C., Elmer K.R. and M. Vences (2024): The effect of hybrids on phylogenomics and subspecies delimitation in Salamandra, a highly diversified amphibian genus. Salamandra 60(2): 105–128
Hausdorf B., Xu J. and S. Bamberger (2024): Repeated colonization of the Northern Limestone Alps from the Southern Limestone Alps by the rock-dwelling snail species Cochlostoma henricae. Zoologica Scripta. [DOI: 10.1111/zsc.12659]
Höhna S., Lower S.E., Duchen P. and A. Catalán (2024): Robustness of Divergence Time Estimation Despite Gene Tree Estimation Error: A Case Study of Fireflies (Coleoptera: Lampyridae). Systematic Biology. [DOI: 10.1093/sysbio/syae065]
Hörandl, E. (2024): Apomixis and the paradox of sex in plants. Annals of Botany, Volume 134, Issue 1. [DOI: 10.1093/aob/mcae044]
Hühn P., McDonald J., Shepherd K.A. and G. Kadereit (2024):
Diversification of Camphorosmeae (Amaranthaceae S.L.) during the Miocene-Pliocene aridification of inland Australia. Perspectives in Plant Ecology, Evolution and Systematics. [DOI: 10.1016/j.ppees.2024.125811]
Karbstein K., Kösters L., Hodač L., Hofmann M., Hörandl E., Tomasello S., Wagner N.D., Emerson B.C., Albach D.C., Scheu S., Bradler S., de Vries J., Irisarri I., Li H., Soltis P., Mäder P. and J. Wäldchen (2024): Species delimitation 4.0: integrative taxonomy meets artificial intelligence. Trends in Ecology & Evolution. [DOI: 10.1016/j.tree.2023.11.002]
Kemler M., Denchev T.T., Feige A., Denchev C.M. and D. Begerow (2024): Host specificity in the fungal plant parasite Anthracoidea sempervirentis (Anthracoideaceae, Ustilaginales) reveals three new species and indicates a potential split in the host plant Carex sempervirens. Fungal Systematics and Evolution. [DOI: 10.3114/fuse.2024.13.04]
Lennartz (née Rybarski) A.E., Nitsche F., Schoenle A., Voigt C., Staubwasser M. and H. Arndt (2024): High diversity and isolated distribution of aquatic heterotrophic protists in salars of the Atacama Desert at different salinities. European Journal of Protistology, Volume 89, June 2023, 125987. [DOI: 10.1016/j.ejop.2023.125987]
Manzo E., Nillies S., Gutiérrez D.G., Panero J.L., Bräuchler C. and S. Tomasello (2024): Species delimitation in Xanthium sect. Acanthoxanthium (Heliantheae, Asteraceae) and the neglected species Xanthium argenteum. TAXON. [DOI: 10.1002/tax.13245]
Marinček P., Léveillé-Bourret É., Heiduk F., Leong J., Bailleul S.M., Volf M. and N.D. Wagner (2024): Challenge accepted: Evolutionary lineages versus taxonomic classification of North American shrub willows (Salix). American Journal of Botany. [DOI: 10.1002/ajb2.16361]
Miralles A., Puillandre N. and M. Vences (2024): DNA Barcoding in Species Delimitation: From Genetic Distances to Integrative Taxonomy. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_4]
Oberprieler C., Lenz D., Donhauser P. and C. Bässler (2024): Surviving the extinction vortex? Discovering remnant stands of Senecio hercynicus (Compositae, Senecioneae) evading genetic swamping by its congener S. ovatus in the Bavarian and Bohemian Forest region. Flora 320: 152602. [DOI: 10.1016/j.flora.2024.152602]
Ogutcen E., de Lima Ferreira P., Wagner N.D., Marinček P., Leong J.V., Aubona G., Cavender-Bares J., Michálek J., Schroeder L., Sedio B.E., Vašut R.J. and M. Volf (2024): Phylogenetic insights into the Salicaceae: The evolution of willows and beyond. Molecular Phylogenetics and Evolution. [DOI: 10.1016/j.ympev.2024.108161]
Puillandre N., Miralles A., Brouillet S., Fedosov A., Fischell F., Patmanidis S. and M. Vences (2024): Species Delimitation and Exploration of Species Partitions with ASAP and LIMES. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_20]
Rissi D., Ijaz M. and C. Baschien (2024): Comparative Genomics of Fungi in Nectriaceae Reveals Their Environmental Adaptation and Conservation Strategies. J. Fungi [DOI: 10.3390/jof10090632]
Rossel S., Peters J., Charzinski N., Eichsteller A., Laakmann S., Neumann H., and P. Martínez Arbizu (2024): A universal tool for marine metazoan species identification: towards best practices in proteomic fingerprinting. Scientific Reports, 14, 1280. [DOI: 10.1038/s41598-024-51235-z]
Schmidt R., Dufresnes C., Krištín A., Künzel S., Vences M., and O. Hawlitschek (2024): Phylogenetic insights into Central European Chorthippus and (Orthoptera: Acrididae) species using ddRADseq data. Molecular Phylogenetics and Evolution, 108012. [DOI: 10.1016/j.ympev.2024.108012]
Schöneberg Y., Audisio T.L., Hamadou A.B., Forman M., Král J., Kořínková T., Líznarová E., Mayer C., Prokopcová L., Krehenwinkel H., Prost S. and S. Kennedy (2024): Three novel spider genomes unveil spidroin diversification and Hox Cluster Architecture: Ryuthela nishihirai (Liphistiidae), Uloborus plumipes (Uloboridae) and Cheiracanthium punctorium (Cheiracanthiidae). Molecular Ecology Resources. [DOI: 10.1111/1755-0998.14038]
Suchan T., Dufresnes C., Schmidt R., Ambu J., Gippner S., and M. Vences (2024): ddRADseq for animal population genomics/phylogenomics. protocols.io [DOI: 10.17504/protocols.io.kxygx3nzwg8j/v1]
Suthaus A. and S. Hess (2024): The vampyrellid amoeba Strigomyxa ruptor gen. et sp. nov. and its remarkable strategy to acquire algal cell contents. Ecology and Evolution. [DOI: 10.1002/ece3.70191]
Tomasello S., Manzo E. and K. Karbstein (2024): Comparative plastome assembly of the yellow ironweed (Verbesina alternifolia) using Nanopore and Illumina reads. Frontiers in Plant Science. [DOI: 10.3389/fpls.2024.1429494]
Vences M., Miralles A., and R. DeSalle (2024): A Glossary of DNA Barcoding Terms. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_35]
Vences M., Miralles A., and C. Dufresnes (2024): Next-generation species delimitation and taxonomy: Implications for biogeography. Journal of Biogeography. [DOI: 10.1111/jbi.14807]
Vences M., Patmanidis S., Fedosov A., Miralles A., and N. Puillandre (2024): iTaxoTools 1.0: Improved DNA Barcode Exploration with TaxI2. In: DeSalle, R. (eds) DNA Barcoding. Methods in Molecular Biology, vol 2744. Humana, New York, NY. [DOI: 10.1007/978-1-0716-3581-0_18]
Vences M., Köhler J., Hutter C.R., Preick M., Petzold A., Rakotoarison A., Ratsoavina F.M., Glaw F. and M.D. Scherz (2024): Communicator whis-tles: A Trek through the taxonomy of the Boophis marojezensis complex (Anura: Mantellidae) reveals seven new, morphologically cryptic treefrogs from Madagascar. Vertebrate Zoology. [DOI: 10.3897/vz.74.e121110]
Vences M., Patmanidis S., Schmidt J.C., Matschiner M., Miralles A. and S.S. Renner (2024): Hapsolutely: a user-friendly tool integrating haplotype phasing, network construction and haploweb calculation. Bioinformatics Advances, Volume 4, Issue 1, 2024, vbae083 [DOI: 10.1093/bioadv/vbae083]
Wolff J.O., Kennedy S.R., Houghton M., Pascoe P., Gajski D., Derkarabetian S., Fraser C., Krehenwinkel H. and D. Renault (2024): Infrequent long-range dispersal and evolution of a top terrestrial arthropod predator in the sub-Antarctic. The American Naturalist, Volume 204, Number 2 [DOI: 10.1086/730827]
2023
Bradican J.P., Tomasello S., Boscutti F., Karbstein K., and E. Hörandl (2023): Phylogenomics of southern European taxa in the Ranunculus auricomus species complex: The apple doesn’t fall far from the tree. Plants. 2023; 12(21):3664. [DOI: 10.3390/plants12213664]
Dietz L., Eberle J., Mayer C., Kukowka S., Bohacz C., Baur H., Espeland M., Huber B.A., Hutter C., Mengual X., Peters R.S., Vences M., Wesener T., Willmott K., Misof B., Niehuis O., and D. Ahrens (2023): Standardized nuclear markers improve and homogenize species delimitation in Metazoa. Methods in Ecology and Evolution, 14, 543-555 [DOI: 10.1111/2041-210X.14041]
Dietz L., Mayer C., Stolle E., Eberle J., Misof B., Podsiadlowski L., Niehuis O., and D. Ahrens (2023): Metazoa-level USCOs as markers in species delimitation and classification. Molecular Ecology Resources, 13921. [DOI: 10.1111/1755-0998.13921]
Dufresnes C., Ambu J., Galán P., Sequeira F., Viesca L., Choda M., Álvarez D., Alard B., Suchan T., Künzel S., Martínez-Solano I., Vences M., and A. Nicieza (2023): Delimiting phylogeographic diversity in the genomic era: application to an Iberian endemic frog. Zoological Journal of the Linnean Society, zlad170. [DOI: 10.1093/zoolinnean/zlad170]
Ehemann N.R., Meyer A., and C.D. Hulsey (2023): Morphological description of spontaneous pelvic fin loss in a neotropical cichlid fish. Journal of Morphology, 285 (1), 21663. [DOI: 10.1002/jmor.21663]
Gajski D., Wolff J.O., Melcher A., Weber S., Prost S., Krehenwinkel H., and S.R. Kennedy (2023): Facilitating taxonomy and phylogenetics: An informative and cost-effective protocol integrating long amplicon PCRs and third-generation sequencing. Molecular Phylogenetics and Evolution, 107988. [DOI: 10.1016/j.ympev.2023.107988]
He L., Guo F.-Y. , Cai X.-J., Chen H.-P., Lian C.-L., Wang Y., Shang C., Zhang Y., Wagner N.D., Zhang Z.-X., Hörandl E., and X.-R. Wang (2023): Evolutionary origin and establishment of a dioecious diploid-tetraploid complex. Molecular Ecology 32(11): 2732-2749. [DOI: 10.1111/mec.16902]
Hodač L., Karbstein K., Tomasello S., Wäldchen J., Bradican J.P., and E. Hörandl (2023): Geometric morphometric versus genomic patterns in a large polyploid plant species complex. Biology, 12, 418. [DOI: 10.3390/biology12030418]
Hörandl, E. (2023): Geographical Parthenogenesis in alpine and arctic plants. Plants, 12(4), 844. [DOI: 10.3390/plants12040844]
Hundsdoerfer A.K., Schell T., Patzold F., Wright C.J., Yoshido A., Marec F., Daneck H., Winkler S., Greve C., Podsiadlowski L., Hiller M., and M. Pippel (2023): High-quality haploid genomes corroborate 29 chromosomes and highly conserved synteny of genes in Hyles hawkmoths (Lepidoptera: Sphingidae). BMC Genomics 443: 1471-2164. [DOI: 10.1186/s12864-023-09506-y]
Lautenschlager U. and A. Scheunert (2023): LoCoLotive: In silico mining for low-copy nuclear loci based on target capture probe sets and arbitrary reference genomes. Applications in Plant Sciences 11(6). [DOI: 10.1002/aps3.11535]
Lennartz (née Rybarski) A. E., Nitsche F., Schoenle A., Voigt C., Staubwasser M. and H. Arndt (2023): High diversity and isolated distribution of aquatic heterotrophic protists in salars of the Atacama Desert at different salinities. European Journal of Protistology. Volume 89, June 2023, 125987 [DOI: 10.1016/j.ejop.2023.125987]
Marinček P., Pittet L., Wagner N.D., and E. Hörandl (2023): Evolution of a hybrid zone of two willow species (Salix L.) in the European Alps analyzed by RAD-seq and morphometrics. Ecology and Evolution 13: e9700. [DOI: 10.1002/ece3.9700]
Michell C., Wagner N.D., Mutanen M., Lee K.M., and T. Nyman (2023): Genomic evidence for contrasting patterns of host-associated genetic differentiation across shared host-plant species in leaf- and bud-galling sawflies. Molecular Ecology 32(7): 1791-1809. [DOI: 10.1111/mec.16844]
Miralles A., Köhler J., Glaw F., Wollenberg Valero K.C., Crottini A., Rosa A.M., du Preez L., Gehring P.-S., Vieites D.R., Ratsoavina F.M., and M. Vences (2023): An endless harvest: integrative revision of the Gephyromantis boulengeri and G. blanci complexes reveals six new species of mantellid frogs from Madagascar. – Salamandra 59: 1-41.
Oberprieler C., Ott T., and R. Vogt (2023): Picks in the fabric of a polyploid complex: integrative species delimitation in the tetraploid Leucanthemum Mill. (Compositae, Anthemideae) representatives. Biology 12: 288. [DOI: 10.3390/biology12020288]
Peters J., Laakmann S., Rossel S., Martínez Arbizu P., and J. Renz (2023): Perspectives of species identification by MALDI‐TOF MS in monitoring—Stability of proteomic fingerprints in marine epipelagic copepods. Molecular Ecology Resources, 23(5), 1077–1091. [DOI: 10.1111/1755-0998.13779]
Pineda Y.M., Keller H., Balderrama-Torrico J., Meve U., Nürk N.M. and S. Liede-Schumann (2023): Phylogenetics in Scyphostelma (Apocynaceae: Orthosiinae) and description of new species. Willdenowia 53: 83–112. [DOI: 10.3372/wi.53.53201]
Rakotoarison A., Scherz M.D., Mullin K.E., Crottini A., Petzold A., Ranjanaharisoa F.A., Maheritafika H.M.R., Rafanoharana J.M., Raherinjatovo H., Andreone F., Glaw F., and M. Vences (2023): Gray versus yellow ventral coloration: Identity, distribution, color polymorphism and molecular relationships of the microhylid frog Platypelis mavomavo Andreone, Fenolio & Walvoord, 2003. – Zootaxa 2352: 221-234. [DOI: 10.11646/zootaxa.5352.2.4]
Renner S.S., Scherz M.D., Schoch C.L., Gottschling M., and M. Vences (2023): DNA sequences from type specimens and type strains - how to increase their number and improve their annotation in NCBI GenBank and related databases. Systematic Biology, syad068. [DOI: 10.1093/sysbio/syad068]
Rissi D.C., Ijaz M., and C. Baschien (2023): Comparative genome analysis of the freshwater fungus Filosporella fistucella indicates potential for plant litter degradation at cold temperatures. G3 Genes|Genomes|Genetics: jkad190. [DOI: 10.1093/g3journal/jkad190]
Rossel S., Kaiser P., Bode‐Dalby M., Renz J., Laakmann S., Auel H., Hagen W., Martínez Arbizu P. and J. Peters (2023): Proteomic fingerprinting enables quantitative biodiversity assessments of species and ontogenetic stages in Calanus congeners (Copepoda, Crustacea) from the Arctic Ocean. Molecular Ecology Resources, 23(2), 382–395. [DOI: 10.1111/1755-0998.13714]
Rossel S., Peters J., Laakmann S., Martínez Arbizu P. and S. Holst (2023): Potential of MALDI‐TOF MS‐based proteomic fingerprinting for species identification of Cnidaria across classes, species, regions and developmental stages. Molecular Ecology Resources, 23(7), 1620–1631. [DOI: 10.1111/1755-0998.13832]
Scheunert A., Lautenschlager U., Ott T., and C. Oberprieler (2023): NANO-STRAINER: a workflow for identification of single-copy nuclear loci for plant systematic studies, using target capture and Oxford Nanopore long reads. Ecology & Evolution 13: e10190. [DOI: 10.1002/ece3.10190]
Sigwart J.D., Chen C., Tilic E., Vences M., and T. Riehl (2023): Why is there no service to support taxonomy? BioEssays 45: 2300070. [DOI: 10.1002/bies.202300070]
Steins L., Duhamel M., Klenner-Koch S., Begerow D. and M. Kemler (2023): Resources and tools for studying convergent evolution in different lineages of smut fungi. Mycological Progress 22(11): 1-31. [DOI: 10.1007/s11557-023-01918-0]
Suthaus A. and S. Hess (2023): Pseudovampyrella gen. nov.: A genus of Vampyrella-like protoplast extractors finds its place in the Leptophryidae. The Journal of Eukaryotic Microbiology: e13002. [DOI: 10.1111/jeu.13002]
van der Sprong J., de Voogd N.J., McCormack G.P., Sandoval K., Schätzle S., Voigt O., Erpenbeck D., Wörheide G., and S. Vargas (2023): A novel target-enriched multilocus assay for sponges (Porifera): Red Sea Haplosclerida (Demospongiae) as a test case. Molecular Ecology Resources. [DOI: 10.1111/1755-0998.13891]
Wagner N.D., Marinček P., Pittet L., and E. Hörandl (2023): Insights into the taxonomically challenging hexaploid alpine shrub willows of Salix sections Phylicifoliae and Nigricantes (Salicaceae). Plants 2023, 12(5), 1144. [DOI: 10.3390/plants12051144]
Žerdoner Čalasan A. and G. Kadereit (2023): Evolutionary seed ecology of heteromorphic Amaranthaceae. Perspectives in Plant Ecology, Evolution and Systematics, Vol. 61, 125759 [DOI: 10.1016/j.ppees.2023.125759]
2022
Belluardo F., Scherz M.D., Santos B., Andreone F., Antonelli A., Glaw F., Muñoz-Pajares A.J., Randrianirina J.E., Raselimanana A.P., Vences M. and Crottini A. (2022): Molecular taxonomic identification and species-level phylogeny of the narrow-mouthed frogs of the genus Rhombophryne (Anura: Microhylidae: Cophylinae) from Madagascar. Systematics and Biodiversity. [DOI: 10.1080/14772000.2022.2039320]
Dorfner M., Ott T., Ott P. and C. Oberprieler (2022): Long-read genotyping with SLANG (Simple Long-read loci Assembly of Nanopore data for Genotyping). Appl. Plant Sci. 10: e11484. [DOI: 10.1002/aps3.11484]
Hörandl, E. (2022): Novel Approaches for Species Concepts and Delimitation in Polyploids and Hybrids. Plants. [DOI: 10.3390/plants11020204]
Hühn P., Dillenberger M.S., Gerschwitz-Eidt, M., Hörandl E., Los J.A., Messerschmid T.F.E., Paetzold C., Rieger B. and G. Kadereit (2022): How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae). Molecular Phylogenetics and Evolution 167:107342. [DOI: 10.1016/j.ympev.2021.107342]
Karbstein K., Tomasello S., Hodač L., Wagner N.D., Marinček P., Barke B.H., Paetzold C. and E. Hörandl (2022): Untying Gordian knots: unraveling reticulate polyploid plant evolution by genomic data using the large Ranunculus auricomus species complex. New Phytologist, 235: 2081-2098. [DOI: 10.1111/nph.18284]
Klasen M., Ahrens D., Eberle J., and V. Steinhage (2022): Image-based automated species identification: Can virtual data augmentation overcome problems of insufficient sampling? Systematic Biology. [DOI: 10.1093/sysbio/syab048]
Lautenschlager U. (2022): Crimp: An efficient tool for summarizing multiple clusterings in population structure analysis and beyond. Mol. Ecol. Resour. [DOI: 10.1111/1755-0998.13734]
Masonick P., Meyer A., and C.D. Hulsey (2022): Phylogenomic analyses show repeated evolution of hypertrophied lips among Lake Malawi cichlid fishes. Genome Biology and Evolution. [DOI: 10.1093/gbe/evac051]
Oberprieler C. (2022): The Wettstein tesseract: a tool for conceptionalising species-rank decisions and illustrating speciation trajectories. Taxon 72: 1-7. [DOI: 10.1002/tax.12825]
Oberprieler C., Conti F., Dorfner M., Eder S., Heuschneider A., Ott T., Scheunert A., and R. Vogt (2022): The taxonomy of Leucanthemum ircutianum DC. (Compositae, Anthemideae) on the Apennine Peninsula based on AFLP fingerprinting, cpDNA sequence variation, and eco-climatological niche reconstruction. Bot. J. Linn. Soc. 199: 830-848. [DOI: 10.1093/botlinnean/boac003]
Ott T., Schall M., Vogt R., and C. Oberprieler (2022): The warps and wefts of a polyploidy complex: integrative species delimitation of the diploid Leucanthemum (Compositae, Anthemideae) representatives. Plants 11: 1878. [DOI: 10.3390/plants11141878]
Rakotoarison R., Glaw F., Rasolonjatovo S.M., Razafindraibe J.H., Vences M. and M.D. Scherz (2022): Discovery of frogs of the Stumpffia hara species group (Microhylidae, Cophylinae) on Montagne d’Ambre in northern Madagascar, with description of a new species. Evolutionary Systematics. [DOI: 10.3897/evolsyst.6.76382]
Rossel S., Uhlenkott K., Peters J., Vink A., and P. Martínez Arbizu (2022): Evaluating species richness using proteomic fingerprinting and DNA barcoding—A case study on meiobenthic copepods from the Clarion Clipperton Fracture Zone. Marine Biodiversity, 52(6), 67. [DOI: 10.1007/s12526-022-01307-y]
Scherz M.D., Masonick P.K., Meyer A. and C.D. Hulsey. (2022): Between a rock and a hard polytomy: phylogenomics of the rock-dwelling mbuna cichlids of Lake Malaŵi. Systematic Biology. (in press). [DOI: 10.1093/sysbio/syac006]
Scherz M.D., Crottini A., Hutter C.R., Hildenbrand A., Andreone F., Fulgence T.R., Köhler G., Ndriantsoa S.H., Ohler A., Preick M., Rakotoarison A., Rancilhac A., Raselimanana A.P., Riemann J.C., Rödel M., Rosa G.M., Streicher J.W., Vieites D.R., Köhler J., Hofreiter M., Glaw F. and M. Vences. (2022): An inordinate fondness for inconspicuous brown frogs: integration of phylogenomics, archival DNA analysis, morphology, and bioacoustics yields 24 new taxa in the subgenus Brygoomantis (genus Mantidactylus) from Madagascar. Megataxa. [DOI:
10.11646/megataxa.7.2.1]
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Schiwitza S., Thomsen H.A., and Leadbeater B.S.C. (2022): Morphological and molecular reinvestigation of acanthoecid species II. – Pseudostephanoeca paucicostata (Tong et al., 1998) gen. et comb. nov. (=Stephanoeca diplocostata var. paucicostata Throndsen, 1969) including also the description of Pseudostephanoeca quasicupula sp. nov. and Stephanoeca ellisfiordensis sp. nov. European Journal of Protistology [DOI: 10.1016/j.ejop.2022.125919]
Schiwitza S., Thomsen H.A., and Leadbeater B.S.C. (2022): Morphological and molecular reinvestigation of acanthoecid species III. – Kalathoeca cupula (Leadbeater, 1972) gen. et comb. nov. (=Stephanoeca cupula (Leadbeater) Thomsen, 1988). European Journal of Protistology [DOI: 10.1016/j.ejop.2022.125943]
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2021
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2020
Bamberger S., Duda M., Tribsch A., Haring E., Sattmann H., Macek O., Affenzeller M. and L. Kruckenhauser (2020): Genome-wide nuclear data confirm two species in the Alpine endemic land snail Noricella oreinos s.l. (Gastropoda, Hygromiidae). Journal of Zoological Systematics and Evolutionary Research. [DOI: 10.1111/jzs.12362]
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2019
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Hulsey C.D., Alfaro M.E., Zheng J., Meyer A. and R. Holzman (2019): Pleiotropic jaw morphology links the evolution of mechanical modularity and functional feeding convergence in Lake Malawi cichlids. Proceedings of the Royal Society Series B. 286: 20182358. [DOI: 10.1098/rspb.2018.2358]
Koch E.L., Neiber M.T., Walther F. and B. Hausdorf (2019): Patterns and processes in a non-adaptive radiation: Alopia (Gastropoda, Clausiliidae) in the Bucegi Mountains. – Zoologica Scripta. [DOI: 10.1111/zsc.12406]
Laakmann S., E.L. Markhaseva, and J. Renz (2019): Do molecular phylogenies unravel the relationships among the evolutionary young “Brafordian” families (Copepoda; Calanoida)? Molecular Phylogenetics and Evolution 130: 330 – 345. [DOI: 10.1016/j.ympev.2018.10.028]
Mikhailyuk T., Vinogradova O., Holzinger A., Glaser K., Samolov E. and U. Karsten (2019): New record of the rare genus Crinalium Crow (Oscillatoriales, Cyanobacteria) from sand dunes of the Baltic Sea, Germany: epitypification and emendation of Crinalium magnum Fritsch et John based on an integrative approach. Phytotaxa 400: 165. [DOI: 10.11646/phytotaxa.400.3.4]
Neiber M.T., Helfenrath K., Walther F. and B. Hausdorf (2019): Ecological specialization resulting in restricted gene flow promotes differentiation in door snails. – Molecular Phylogenetics and Evolution 141. [DOI: 10.1016/j.ympev.2019.106608]
Nurinsiyah A.S., Neiber M.T. and B. Hausdorf (2019): Systematic revision of the genus Landouria Godwin-Austen, 1918 (Gastropoda, Camaenidae) from Java. – European Journal of Taxonomy 526: 1–73. [DOI: 10.5852/ejt.2019.526]
Oberprieler C., Schinhärl L., Wagner F., Hugot L. and R. Vogt (2019): Karyological and molecular analysis of Leucanthemum Mill. (Compositae, Anthemideae) in Corsica. – Willdenowia 49: 411-420.
Rancilhac L., Goudarzi F., Gehara M., Hemami M.-R., Elmer K.R., Vences M. and S. Steinfarz (2019): Phylogeny and species delimitation of near Eastern Neurergus newts (Salamandridae) based on genome-wide RADseq data analysis. Molecular Phylogenetics and Evolution [DOI: 10.1016/j.ympev.2019.01.003]
Renner S.S. and C. Zohner (2019): The occurrence of red and yellow autumn leaves explained by regional differences in insolation and temperature. New Phytologist Tansley Review 224: 1464-1471. [DOI: 10.1111/nph.15900]
Samolov E., Mikhailyuk T., Lukešová A., Glaser K., Büdel B. and U. Karsten (2019): Usual alga from unusual habitats: Biodiversity of Klebsormidium (Klebsormidiophyceae, Streptophyta) from the phylogenetic superclade G isolated from biological soil crusts. Molecular Phylogenetics and Evolution 133: 236 – 255. [DOI: 10.1016/j.ympev.2018.12.018]
Scherz M., Hutter C., Rakotoarison A., Riemann J., Rödel M.-O., Ndriantsoa S., Glos J., Roberts S., Crottini A., Vences M. and F. Glaw (2019): Morphological and ecological convergence at the lower size limit for vertebrates highlighted by five new miniaturised microhylid frog species from three different Madagascan genera. PLoS ONE 14(3): e0213314. [DOI: 10.1371/journal.pone.0213314]
Schiwitza S., Arndt H. and F. Nitsche (2019): First description of an euryoecious acanthoecid choanoflagellate species, Enibas tolerabilis gen. et sp. nov. from a salar in the Chilean Andes based on morphological and transcriptomic data. European Journal of Protistology 67: 106 – 113. [DOI: 10.1016/j.ejop.2018.11.004]
Vandendorpe J., van Baak C.G.C., Stelbrink B., Delicado D., Albrecht C. and T. Wilke (2019): Historical faunal exchange between the Pontocaspian Basin and North America. Ecology and Evolution 9: 10816 – 10827. [DOI: https://doi.org/10.1002/ece3.5602]
Wagner F., T. Ott, C. Zimmer, V. Reichart, R. Vogt and C. Oberprieler (2019): At the crossroads towards polyploidy’: Genomic divergence and extent of homoploid hybridisation are drivers for the formation of the ox-eye daisy polyploid complex (Leucanthemum Mill., Compositae-Anthemideae). New Phytologist. [DOI: 10.1111/nph.15784]
Yakovchenko L.S., Davydov E.A., Ohmura Y. and C. Printzen (2019): The phylogenetic position of species of Lecanora s. lat. containing calycin and usnic acid, with the description of Lecanora solaris Yakovchenko & Davydov sp. nov. Lichenologist 51: 147 – 156. [DOI: 10.1017/S0024282919000045]
Zhao G., Lian Q., Zhang Z., … Schaefer H., Fan W., Bendahmane A., Fei Z., Pitrat M., Gabaldon T., Lin T., Garcia-Mas J., Xu Y. and S. Huang (2019): A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits. Nature Genetics 51: 1607-1615. [DOI: 10.1038/s41588-019-0522-8]
Zohner C. and S.S. Renner (2019): Ongoing seasonally uneven climate warming leads to earlier autumn growth cessation in deciduous trees. Oecologia 189: 549-561. [DOI: 10.1007/s00442-019-04339-7]
Zohner C., Ramm E., and S.S. Renner (2019): Examining the support-supply and bud-packing hypotheses for the increase in toothed leaf margins in northern deciduous floras. American Journal of Botany 106(11): 1404-1411. [DOI: 10.1002/ajb2.1379]
2018
Glemser B., Kloster M., Esper O., Eggers S.L., Kauer G. and B. Beszteri (2019): Biogeographic differentiation between two morphotypes of the Southern Ocean diatom Fragilariopsis kerguelensis. Polar Biology 42: 1369 – 1376. [DOI: https://doi.org/10.1007/s00300-019-02525-0]
Hodač L., Barke B.H. and E. Hörandl (2018): Mendelian segregation of leaf phenotypes in experimental F2 hybrids elucidates origin of morphological diversity of the apomictic Ranunculus auricomus complex. Taxon 67(6): 1082 – 1092. [DOI: https://doi.org/10.12705/676.6]
Höpke J., Brewer G., Dodsworth S., Ortiz E. and D. Albach (2018): DNA extraction from old herbarium material of Veronica subgen. Pseudolysimachium (Plantaginaceae). Ukrainian Botanical Journal 75: 564 – 575. [DOI: 10.15407/ukrbotj75.06.564]
Hörandl E. (2018): The classification of asexual organisms: Old myths, new facts, and a novel pluralistic approach. Taxon 67(6): 1066 – 1081. [DOI: 10.12705/676.5]
Mikhailyuk T., Lukesová A., Glaser K., Holzinger A., Obwegeser S., Nyporko S., Friedl T. and U Karsten. (2018): New Taxa of Streptophyte Algae (Streptophyta) from terrestrial habitats revealed using an integrative approach Protist, Vol. 169: 406 – 431. [DOI: 10.1016/j.protis.2018.03.002]
Pierangelini M., Glaser K., Mikhailyuk T., Karsten U. and Holzinger A. [submitted]: Light and dehydration but not temperature drive photosynthetic adaptations of basal streptophytes (Hormidiella, Streptosarcina and Streptofilum) living in terrestrial habitats. Microbial Ecology. [DOI: 10.1007/s00248-018-1225-x]
Renard E., Leys S., Wörheide G. and Borchiellini C. (2018): Understanding animal evolution: The added value of sponge transcriptomics and genomics: The disconnect between gene content and body plan evolution. BioEssays: 1700237. [DOI: 10.1002/bies.201700237, PDF]
Renz J., E.L. Markhaseva, and S. Laakmann (2018): The phylogeny of Ryocalanoidea (Copepoda, Calanoida) based on morphology and a multi-gene analysis with a description of new ryocalanoidean species. Zoological Journal of the Linnean Society XX: 1 – 33. [DOI: 10.1093/zoolinnean/zly069]
Schiwitza S., Arndt H., Nitsche F. (2018): Four new choanoflagellate species from extreme saline environments: Indication for isolation-driven speciation exemplified by highly adapted Craspedida from salt flats in the Atacama Desert (Northern Chile). European Journal of Protistology 66: 86 – 96. [DOI: 10.1016/j.ejop.2018.08.001, PDF]
Surup F., Narmani A., Wendt L., Pfütze S., Kretz R., Becker K., Menbrivès C., Giosa A., Elliott M., Petit C., Rohde M. and M. Stadler (2018): Identification of fungal fossils and novel azaphilone pigments in ancient carbonised specimens of Hypoxylon fragiforme from forest soils of Châtillon-sur-Seine (Burgundy). Fungal Diversity 92: 345 – 356. [DOI: 10.1007/s13225-018-0412-x]
Wasil Z., Kuhnert E., Simpson T.J. and R.J. Cox (2018): Oryzines A & B, Maleidride Congeners from Aspergillus oryzae and Their Putative Biosynthesis. Journal of Fungi 4(3): 96. [DOI: https://doi.org/10.3390/jof4030096]
Zohner C., Mo L-D., and S.S. Renner (2018): Global warming reduces leaf-out and flowering synchrony among individuals. eLife. [DOI: 10.7554/eLife.40214]
Zohner C., Rockinger A., and S.S. Renner (2018): Increased autumn productivity permits temperate trees to compensate for spring frost damage. New Phytologist 221: 789-795. [DOI: 10.1111/nph.15445]
2017
Albach D.C., Pifkó D. and Z. Barina (2017): Typifications and taxonomic notes for Veronica subgen. Pseudolysimachium (Plantaginaceae) based on material from the Hungarian Natural History Museum Budapest (BP). Phytotaxa 331(1): 035–050 [DOI: 10.11646/phytotaxa.331.1.2]
Zohner C.M., Benito B.M., Fridley J.D., Svenning J.-C. and S.S. Renner (2017): Spring predictability explains different leaf-out strategies in the woody floras of North America, Europe and East Asia. Ecology Letters. Wiley-Blackwell 20(4): 452 – 460. [DOI: 10.1111/ele.12746]